Atomistry » Iridium » PDB 5e1u-7onm » 6plb
Atomistry »
  Iridium »
    PDB 5e1u-7onm »
      6plb »

Iridium in PDB 6plb: Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl

Enzymatic activity of Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl

All present enzymatic activity of Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl:
3.2.1.17;

Protein crystallography data

The structure of Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl, PDB code: 6plb was solved by M.P.Sullivan, C.G.Hartinger, D.C.Goldstone, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.20 / 1.30
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.338, 78.338, 37.833, 90.00, 90.00, 90.00
R / Rfree (%) 15.1 / 19

Other elements in 6plb:

The structure of Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 1 atom

Iridium Binding Sites:

The binding sites of Iridium atom in the Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl (pdb code 6plb). This binding sites where shown within 5.0 Angstroms radius around Iridium atom.
In total only one binding site of Iridium was determined in the Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl, PDB code: 6plb:

Iridium binding site 1 out of 1 in 6plb

Go back to Iridium Binding Sites List in 6plb
Iridium binding site 1 out of 1 in the Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl


Mono view


Stereo pair view

A full contact list of Iridium with other atoms in the Ir binding site number 1 of Adducts Formed After 1 Month in the Reaction of Dichlorido(1,3- Dimethylbenzimida Zol-2-Ylidene)(ETA5-Pentamethylcyclopentadienyl) Iridium(III) with Hewl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ir201

b:25.0
occ:0.50
 IR A:OT1201 0.0 25.0 0.5
OD2 A:ASP101 1.9 31.3 1.0
C1 A:OT1201 2.1 22.3 0.5
C18 A:OT1201 2.1 27.6 0.5
C10 A:OT1201 2.2 27.7 0.5
C12 A:OT1201 2.2 26.7 0.5
C16 A:OT1201 2.2 27.0 0.5
C14 A:OT1201 2.2 27.2 0.5
CL1 A:OT1201 2.4 36.1 0.5
CG A:ASP101 2.8 34.8 1.0
OD1 A:ASP101 3.1 43.5 1.0
N2 A:OT1201 3.1 24.0 0.5
N1 A:OT1201 3.1 22.7 0.5
C13 A:OT1201 3.3 26.7 0.5
C11 A:OT1201 3.3 29.2 0.5
C19 A:OT1201 3.3 29.5 0.5
C17 A:OT1201 3.3 29.2 0.5
C15 A:OT1201 3.4 30.0 0.5
C3 A:OT1201 3.5 25.0 0.5
C2 A:OT1201 3.6 23.2 0.5
O A:ASP101 4.0 38.1 1.0
CB A:ASP101 4.2 31.6 1.0
C5 A:OT1201 4.3 22.2 0.5
C4 A:OT1201 4.3 23.8 0.5
C A:ASP101 4.8 29.7 1.0

Reference:

M.P.Sullivan, D.C.Goldstone, C.G.Hartinger. Linking Biological Activity to Chemical Properties: Structure-(Re)Activity Relationships of Anticancer N-Heterocyclic Carbene Organometallics To Be Published.
Page generated: Mon Aug 12 03:41:33 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy