Atomistry » Iridium » PDB 7onq-9bun » 8aqy
Atomistry »
  Iridium »
    PDB 7onq-9bun »
      8aqy »

Iridium in PDB 8aqy: Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation

Protein crystallography data

The structure of Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation, PDB code: 8aqy was solved by N.V.Igareta, T.R.Ward, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.01 / 1.65
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 192.913, 57.846, 57.846, 90, 107.45, 90
R / Rfree (%) 16.9 / 20.1

Other elements in 8aqy:

The structure of Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Iridium Binding Sites:

The binding sites of Iridium atom in the Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation (pdb code 8aqy). This binding sites where shown within 5.0 Angstroms radius around Iridium atom.
In total 4 binding sites of Iridium where determined in the Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation, PDB code: 8aqy:
Jump to Iridium binding site number: 1; 2; 3; 4;

Iridium binding site 1 out of 4 in 8aqy

Go back to Iridium Binding Sites List in 8aqy
Iridium binding site 1 out of 4 in the Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation


Mono view


Stereo pair view

A full contact list of Iridium with other atoms in the Ir binding site number 1 of Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ir201

b:32.4
occ:0.70
IR1 A:NOF201 0.0 32.4 0.7
N1 A:NOF201 2.1 36.4 1.0
N5 A:NOF201 2.1 42.1 1.0
C7 A:NOF201 2.2 38.2 0.7
C5 A:NOF201 2.2 37.5 0.7
C1 A:NOF201 2.3 38.9 0.7
C3 A:NOF201 2.3 38.6 0.7
C9 A:NOF201 2.3 36.4 0.7
CL46 A:NOF201 2.8 52.0 0.7
C12 A:NOF201 2.8 36.3 1.0
C11 A:NOF201 2.8 37.4 1.0
C30 A:NOF201 3.1 49.5 1.0
C6 A:NOF201 3.3 42.3 0.7
C8 A:NOF201 3.3 36.0 0.7
C18 A:NOF201 3.3 38.3 1.0
O3 A:NOF201 3.3 52.9 0.6
C4 A:NOF201 3.3 36.1 0.7
C10 A:NOF201 3.3 33.8 1.0
C2 A:NOF201 3.4 38.2 0.7
C6 C:NOF201 4.1 48.0 0.7
C33 A:NOF201 4.2 54.5 0.6
O4 A:NOF201 4.2 51.3 0.6
C14 A:NOF201 4.3 34.1 1.0
C13 A:NOF201 4.3 32.9 1.0
C19 A:NOF201 4.6 34.8 1.0
C31 A:NOF201 4.7 54.6 0.6
O A:HOH374 4.8 29.1 1.0
C17 A:NOF201 5.0 33.9 1.0

Iridium binding site 2 out of 4 in 8aqy

Go back to Iridium Binding Sites List in 8aqy
Iridium binding site 2 out of 4 in the Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation


Mono view


Stereo pair view

A full contact list of Iridium with other atoms in the Ir binding site number 2 of Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ir201

b:33.9
occ:0.70
IR1 B:NOF201 0.0 33.9 0.7
N1 B:NOF201 2.1 38.9 1.0
N5 B:NOF201 2.1 42.9 1.0
C7 B:NOF201 2.2 40.2 0.7
C5 B:NOF201 2.2 39.3 0.7
C1 B:NOF201 2.3 41.2 0.7
C3 B:NOF201 2.3 41.1 0.7
C9 B:NOF201 2.3 37.8 0.7
CL46 B:NOF201 2.8 53.3 0.7
C12 B:NOF201 2.8 38.6 1.0
C11 B:NOF201 2.8 38.1 1.0
C30 B:NOF201 3.1 45.1 0.6
C6 B:NOF201 3.2 44.8 0.7
C18 B:NOF201 3.3 39.8 1.0
C8 B:NOF201 3.3 39.0 0.7
C4 B:NOF201 3.3 38.7 0.7
O4 B:NOF201 3.3 50.9 0.6
C10 B:NOF201 3.4 34.1 0.7
C2 B:NOF201 3.4 41.1 0.7
C8 D:NOF201 3.6 46.8 0.7
O3 B:NOF201 4.2 44.7 0.6
C14 B:NOF201 4.3 37.4 1.0
C13 B:NOF201 4.3 32.1 1.0
C19 B:NOF201 4.5 36.5 1.0
C31 B:NOF201 4.6 50.1 0.6
O3 D:NOF201 4.7 48.5 0.6
C32 B:NOF201 4.9 48.4 0.6
C17 B:NOF201 5.0 36.6 1.0
C33 B:NOF201 5.0 49.6 0.6

Iridium binding site 3 out of 4 in 8aqy

Go back to Iridium Binding Sites List in 8aqy
Iridium binding site 3 out of 4 in the Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation


Mono view


Stereo pair view

A full contact list of Iridium with other atoms in the Ir binding site number 3 of Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ir201

b:32.9
occ:0.70
IR1 C:NOF201 0.0 32.9 0.7
N5 C:NOF201 2.1 44.3 1.0
N1 C:NOF201 2.1 39.2 1.0
C5 C:NOF201 2.2 42.1 0.7
C7 C:NOF201 2.2 42.2 0.7
C3 C:NOF201 2.2 42.9 0.7
C1 C:NOF201 2.2 42.1 0.7
C9 C:NOF201 2.3 45.6 0.7
CL46 C:NOF201 2.8 54.1 0.7
C11 C:NOF201 2.8 40.0 1.0
C12 C:NOF201 2.8 38.7 1.0
C30 C:NOF201 3.1 45.8 0.6
C6 C:NOF201 3.2 48.0 0.7
C4 C:NOF201 3.3 40.1 0.7
C18 C:NOF201 3.3 36.5 1.0
C8 C:NOF201 3.3 44.3 0.7
C10 C:NOF201 3.3 44.6 0.7
C2 C:NOF201 3.4 42.1 0.7
O4 C:NOF201 3.4 53.1 0.6
C32 C:NOF201 3.9 52.0 0.6
C6 A:NOF201 4.0 42.3 0.7
O3 C:NOF201 4.2 45.7 0.6
C31 C:NOF201 4.2 52.0 0.6
C8 A:NOF201 4.3 36.0 0.7
C14 C:NOF201 4.3 37.3 1.0
C13 C:NOF201 4.3 34.3 1.0
C19 C:NOF201 4.6 35.2 1.0
O3 A:NOF201 4.9 52.9 0.6
C5 A:NOF201 4.9 37.5 0.7
C17 C:NOF201 5.0 34.5 1.0

Iridium binding site 4 out of 4 in 8aqy

Go back to Iridium Binding Sites List in 8aqy
Iridium binding site 4 out of 4 in the Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation


Mono view


Stereo pair view

A full contact list of Iridium with other atoms in the Ir binding site number 4 of Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ir201

b:31.5
occ:0.70
IR1 D:NOF201 0.0 31.5 0.7
N1 D:NOF201 2.1 37.3 1.0
N5 D:NOF201 2.1 42.5 1.0
C7 D:NOF201 2.2 39.1 0.7
C5 D:NOF201 2.2 40.5 0.7
C9 D:NOF201 2.2 38.8 0.7
C1 D:NOF201 2.3 43.4 0.7
C3 D:NOF201 2.3 40.5 0.7
CL46 D:NOF201 2.7 52.8 0.7
C11 D:NOF201 2.8 37.5 1.0
C12 D:NOF201 2.8 38.3 1.0
C30 D:NOF201 3.1 46.5 0.6
C8 D:NOF201 3.2 46.8 0.7
C6 D:NOF201 3.3 38.7 0.7
C18 D:NOF201 3.3 37.6 1.0
C10 D:NOF201 3.3 49.1 0.7
C2 D:NOF201 3.3 37.3 0.7
O3 D:NOF201 3.4 48.5 0.6
C4 D:NOF201 3.4 44.0 0.7
C33 D:NOF201 4.0 54.5 0.6
C6 B:NOF201 4.1 44.8 0.7
O4 D:NOF201 4.2 49.6 0.6
C14 D:NOF201 4.3 35.8 1.0
C13 D:NOF201 4.3 31.5 1.0
C8 B:NOF201 4.3 39.0 0.7
C19 D:NOF201 4.6 35.0 1.0
C31 D:NOF201 4.6 54.4 0.6
O D:HOH370 4.9 30.7 1.0
C17 D:NOF201 5.0 33.4 1.0

Reference:

N.V.Igareta, T.R.Ward. Streptavidin Mutant S112A with An Iridium Catalyst For Ch Activation To Be Published.
Page generated: Mon Aug 12 03:52:59 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy